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Universities / Laboratories

• Nagoya University
• Graduate School of Engineering, Nagoya University
• Department of Physical Science and Engineering, Nagoya University
• Department of Applied Physics, Graduate School of Engineering, Nagoya University
• Department of Materials Physics, Graduate School of Engineering, Nagoya University
• Rheology Physics Group, Department of Materials Physics, Graduate School of Engineering, Nagoya University
• Mathematical Engineering Group, Department of Applied Physics, Graduate School of Engineering, Nagoya University
• Zhang Laboratory, Department of Computational Science and Engineering, Graduate School of Engineering, Nagoya University
• Kanazawa University
• School of Natural System, College of Science and Engineering, Kanazawa University
• Polymer Physics Laboratory, School of Natural System, College of Science and Engineering, Kanazawa University
• Kyoto University
• Institute for Chemical Research, Kyoto University
• Laboratory of Molecular Rheology (Watanabe Laboratory), Division of Multidisciplinary Chemistry, Institute for Chemical Research, Kyoto University
• Graduate School of Science, Kyoto University
• Department of Physics, Graduate School of Science, Kyoto University
• Nonlinear Dynamics Group, Department of Physics, Graduate School of Science, Kyoto University
• Yukawa Institute for Theoretical Physics, Kyoto Univeristy

Projects

• JST-CREST Multiscale Simulations for Softmatters (MSS) Project

Societies

• The Physical Society of Japan
• The Society of Polymer Science, Japan
• The Society of Rheology, Japan
• The Society of Rubber Science and Technology, Japan
• The Society of Rheology

Preprints / Search Engines

• arXiv.org e-Print archive
• Google Scholar

Compilers / Interpreters

• GCC (GNU Compiler Collection)
• Intel C++ Compiler for Linux
• Intel Fortran Compiler for Linux
• Borland C++ Compiler 5.5
• Microsoft Visual C++ Toolkit 2003
• Visual C++ 2005 Express Edition
• MinGW - Minimalist GNU for Windows
• Cygwin Information and Installation
• The CINT C++ Interpreter
• Perl.com
• Ruby
• Python Programming Language
• The Programming Language Lua
• Gawk (GNU Awk)
• GNU Octave
• Scilab
• FreeMat
• The R Project for Statistical Computing
• Frink

Specifications and Books for Programing Languages

• Rational for ANSI C
• ANSI Fortran 77 Standard
• Computer-Books.us

Parallel Programming

• MPICH
• Open MPI: Open Source High Performance Computing
• Omni OpenMP Compiler Project
• GOMP - An OpenMP implementation for GCC
• CUDA Zone

Symbolic Computations

• Maxima - A GPL CAS based on DOE-MACSYMA
• REDUCE Computer Algebra System at SourceForge

Libraries for Numerical Computations

• The Netlib
• The Netlib, Phase AIST (Japan) mirror
• Numerical Recipes Books On-Line
• FFTW (Fastest Fourier Transform in the West)
• Mersenne Twister: A random number generator
• LAPACK (Linear Algebra PACKage)
• ATLAS (Automatically Tuned Linear Algebra Software)
• GOTO BLAS (High-Performance BLAS by Kazushige Goto)
• GSL - GNU Scientific Library
• Levmar
• DE-Quadrature

Plotting / Visualization Softwares

• gnuplot
• Ngraph
• OpenDX
• ParaView

Image Processing

• ImageJ
• Fiji
• OpenCV

Free Software Projects / Code Search Engines

• searchcode | source code search engine
• SourceForge.net
• OSDN
• The GNU Operating System